Histological and histochemical methods
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Hematoxylin - Eosin Stain (H&E)
H&E is a good general stain, staining nucleic acids in the nucleus blue and the cytoplasm pink.
1.
Cut tissue sample on a microtome 10 to 12 µm
thick and place onto microscope slides (microscope slides should be
pre-rinsed/cleaned in an ethanol solution). Leave slides at room temperature for
at least 5 min.
2.
Fix sections in 4% formaldehyde-Ca2+ (see notes) for 3-5 min.
3.
Rinse for 5 min in dH2O.
4.
Stain sections with Hematoxylin (Haemalaun acc. Meyer) for 5 min.
5.
Rinse continuously under tap water for 20 min to rinse off remaining Hematoxylin
stain.
6.
Rinse for 5 min in d2H2O.
7.
Stain sections with a 0.1 % solution of Eosin (Potassium salt) in dH2O
for 10 min.
8.
Rinse for 3 min in dH2O.
9.
Wash with:
70% Ethanol for 1 min
96%
Ethanol for 1 min
absolute
Ethanol for 3 min
10.
Fix with Xylol for between 5 and 60 min (dispose of Xylol in a proper receptacle
after use).
11.
Mount a cover slip using a non-aqueous cover slip medium (ie. Histofluid).
Notes:
- To prepare the 4% Formaldehyde solution you add 1 g CaCl2 (water-free - VERY important) for every 100 mL of 4% formaldehyde. A 4% formaldehyde solution can be made from stock 37% Formalin by dilution. To the CaCl2/4% formaldehyde solution you add CaCO3. You need to add enough so that it does not dissolve and it is visible at the bottom of the jar. Basically the solution has to be supersaturated. In our solution you can see about 2 mm of CaCO3 on the bottom of the jar in a slurry. Just make sure to filter the solution before using it. The CaCO3 will go into solution so make sure that you add enough. It should settle to the bottom after awhile.
- The hematoxylin
solution is purchased pre-mixed. We use Mayers Hematoxylin.
The 0.1% Eosin solution is made with water. Simply mix 0.1 g of Eosin in 100 mL
of water.
-
Unless
otherwise noted solutions are to be kept at 4 °C, are good for up to one month,
and can be
disposed of down the sink.
Aniline Blue - Orange G Stain
This stain provides a good contrast between muscle fibers (orange), connective tissue (blue), and fat cells (white).

1.
Cut tissue sample on a microtome 10 to 12 mm
thick and place onto microscope slides (microscope slides should be
pre-rinsed/cleaned in an ethanol solution).
Leave slides at room temperature for at least 5 min.
2.
Fix sections using Müller´s reagent for 1 min.
3.
Rinse for 1 to 2 min in d2H2O.
4.
Stain sections with Orange G for 3 min.
5.
Rinse for 2 min in dH2O (twice).
6.
Stain sections with Aniline Blue for 1 to 3 seconds.
7.
Rinse (with gentle shaking) immediately for 2 to 5 minutes in dH2O
(twice) (until no blue color is seen in the water)
8.
Wash with:
70% Ethanol for 5 to 10 sec
96%
Ethanol for 5 to 10 sec
absolute
Ethanol for 1 to 2 min
9.
Fix with Xylol for between 5 to 60 min (dispose of in proper receptacle).
10.
Mount a cover slip using a non-aqueous cover slip medium (i.e. Histofluid).
Solutions
and Reagents:
Müller´s
reagent (Fresh Daily)
Potassium
dichromate (K2Cr2O7)
2.5 g
Sodium
sulfate (Na2SO4-10H2O) 1.0 g
dH2O
100 mL
Phenol
pinch (tip of a scupula, see notes)
Orange
G solution (Store at room temperature, good for over 1 year)
Orange G
3.0 g
Acetic
Acid, conc.
5.0
mL
dH2O
100 mL
Bring
the solution to a boil, cool to room temperature, and filter.
Aniline
Blue
0.5 g
Acetic
Acid, conc.
5.0 mL
dH2O
100 mL
Bring the solution to a boil, cool to room temperature, and filter.
Notes:
-
The phenol added to the aniline blue/orange G stain is used as a preservative to
stop bacterial growth. The recipe is over 100 years old and was used when water
sources were not as clean as they are today. Imagine the end of a pen and use an
amount of phenol equivalent to the tip of the pen. Its basically just a few
grains.
Mitochondria (Nitro BT) Stain
This stain preferentially locates muscle fiber mitochondria. Muscle fiber type can thus be distinguished by the density of mitochondria. Discrimination is observed between three fiber types, oxidative fibers, type I (high density), glycolytic fibers, type IIB (low density), and an intermediate fiber type, type IIA (medium density).
Procedure:
1.
Cut tissue sample on a microtome 10 to 12 mm
thick and place onto microscope slides (microscope slides should be
pre-rinsed/cleaned in an ethanol solution).
Leave slides at room temperature for at least 5 min.
2.
Fix sections in 4% formaldehyde-Ca2+ for 45 sec (muscle samples 24 h
post mortem) or 5 min (muscle samples 30 min post mortem).
3.
Rinse for 5 min in dH2O.
4.
Incubate sections in Staining Medium for 60 min at 37 °C.
5.
Rinse for 5 min in dH2O.
6.
Mount a cover slip using an aqueous cover slip medium (ie. Glycerine Gelatine).
Staining
Medium
(Fresh Daily)
NADH-Na2
16 mg
Sodium
Phosphate Buffer 0.1M (pH 7.4)
3.2 mL
Nitro-BT
(4-nitro blue tetrazolium
chloride) (1 mg/mL) 4.0
mL
DH2O
4.8 mL
Notes:
-
Unless otherwise noted solutions are to be kept at 4 °C and can be disposed of
down the sink.
Reference
Novikoff,
A; Shin, W.Y.; Drucker, J. (1961) Mitochondrial localization of oxidative
enzymes: Staining results with two tetrazolium salts. Journal of Biophysical and
Biochemical Cytology 9: 47-61
Myofibrillar ATPase Stain
This stain allows a clear discrimination between three fiber types, one slow-twitch fibre, type I (white fibres) and two fast-twitch fiber types, types IIA (light blue) and IIB (dark blue).

Procedure:
1.
Cut tissue sample on a microtome 10 to 12 mm
thick and place onto microscope slides (microscope slides should be
pre-rinsed/cleaned in an ethanol solution).
Leave slides at room temperature for at least 5 min.
2.
Wash twice for 1 min each with Tris-Ca2+ (Pre-Rinse Solution).
3.
Incubate for 5 min in the Alkaline Pre-Incubation Solution.
4.
Wash twice for 30 sec each with Tris-Ca2+ (Pre-Rinse Solution).
5.
Incubate for 90 min at 37 °C in the Incubation Solution.
6.
Wash 4 times for 20 – 30 sec each in CaCl2 Wash Solution.
7.
Rinse for 3 min in a 2% CoCl2 Solution (mix immediately before use).
8.
Rinse 4 times for 20 – 30 sec each in dH2O.
9.
Stain for 28 sec in a 1% Azure Stain (mix immediately before use, see notes).
10.
Rinse continuously under tap water for 5 min to rinse off remaining Azure Stain.
11.
Rinse once with dH2O.
12.
Wash with:
50 % Ethanol for 5 to 10
sec
70%
Ethanol for 5 to 10 sec
96%
Ethanol for 5 to 10 sec
absolute
Ethanol for 1 to 2 min
13. Fix sections using a 1:1 (v:v) solution of Xylol:absolute Ethanol (dispose of in proper receptacle after use).
14.
Mount a cover slip using a non-aqueous cover slip medium (i.e. Histofluid).
Solutions and Reagents:
Pre-Rinse
Solution
(Fresh
Daily) 100 mL 0.18 M CaCl2
(pH
7.3)
12.1 g Trishydroxymethylaminomethane
add dH2O to 1000 mL
Alkaline
Pre-Incubation Solution
10 g CaCl2
(pH
10.4 with 1 N NaOH)
7.44 g Glycine
100 mL Formaldehyd
(37%)
add dH2O to 1000 mL
Incubation
Solution (Fresh Daily)
20
mL 0.1 M Glycine Buffer
(pH
9.4, warm to 37 °C)
10 mL 0.18 M CaCl2 (2%)
0.152 g ATP
add
dH2O to 100 mL
0.1
M Glycine Buffer
125 mL Glycine (7.51g/250 mL dH2O)
(pH
9.4)
42 mL 0.4 M NaOH (8 g/250 mL dH2O)
add dH2O to 500 mL
0.18
M CaCl2
19.98 g CaCl2 in 1000 mL dH2O
CaCl2
Wash Solution
13.3 g CaCl2 in 1000 mL dH2O
Notes:
- Azure A is the most commonly used for this purpose. The 1% Azure A stain is made by dissolving 1 g of Azure A in 100 mL water.
- Unless otherwise noted solutions are to be kept at 4 °C, are good for up to one month, and can be disposed of down the sink.
Reference
Brooke,
M. H., and K. K. Kaiser.
1970. Muscle fiber types: how many and what kind ? Arch. Neurol. 23:369-379.
Szentkuti,
L., and A. Eggers. 1985.
Eine zuverlässige Modifikation der Myosin-ATPase-Reaktion zur histochemischen
Darstellung von drei Fasertypen in der Skelettmuskulatur von Schweinen.
Fleischwirtsch. 65:1398-1404.